Redesign of Photo-Bioreactor. Brian A. Trujillo Talavera and José R. Pérez Jiménez. 1School of
Engineering, 2School of National Science and Technology, Universidad
del Turabo, Gurabo, Puerto Rico, 00778. Abstract: Algae’s are the underwater form of grass. Same as grass reproduces
by photosynthesis, algae’s reproduce equally, therefore algae need light. The
objective of this research is to design a photo bioreactor in order to
cultivate algae in a laboratory scenario. Using the 3D designer program of
SolidWorks we can create a model that better suits our objective and then use a
3D printer to obtain the most accurate precision of the design. A glass bottle
will be used to cultivate the algae under study. A plastic (normal filament)
rack will be design with dimensions of 10x8x8 inches. Each rack will hold six
bottles of different sizes. Malleable plastic skins with LED lights and
aluminum tape will cover each bottle. Electric cables will connect bottles with
each other. Skin covers will allow each bottle to receive maximum light. A timer
will be added to the reactor to allow light and dark cycles during incubation.
The design must be cost effective, with safe materials and can place bottles of
different sizes that allow up scaling of algae cultures. The end product should
be able to be place on a higher bioreactor for industrial purposes. We expect
to make a model with reusable plastic, lightweight material and very versatile
since the rack can also be use also for other type of cultures without the
skin.
Antibiotic Activity by Microbes at the San Juan Bay
Estuary System. Brian Sang-Laboy, Abisrael
Morales-Feliciano, and José R. Pérez-Jiménez.
Puerto Rico Institute for Microbial
Ecology Research, School of Natural Sciences and Technology, Universidad del
Turabo, Gurabo, PR 00778. Abstract: This study analyzed the biodiversity present in the Bay San Juan
Estuary is a system of interconnected lagoon and channels that flow into the
Bay. Throughout this ecosystem, the water column receives discharges from
natural sites, houses, and commercials facilities that have compromised its
quality. Thus, the estuarine system harbors challenges among diverse microbes.
Our objective is to isolate bacteria from the San Juan Bay Estuary that
exhibits antimicrobial activity. Water samples were cultivated in Tryptic Soy
Agar plates aiming for dense cultures. Bacterial exhibiting inhibition zones
were isolated and characterized according to morphology, selected biochemical
tests, and 16S rDNA sequencing. Antimicrobial activity was demonstrated by
inhibition zone in concurrent cultivation with reference stains. The
collections of forty-nine bacteria were isolated with antimicrobial activity.
However, these are halotolerant stains, Gram-positive rods, producing catalase,
and unable to reduce nitrate. Most of the antimicrobial activity was detected
against Pseudomonas putida, Enterococcus raffinosus,
Staphylococcus epidermidis, Bacillus subtilis, and
Lysobacter antibioticus. The twenty-six isolated were able to
inhibit the growth of four reference stains. Sequencing of the 16S rDNA
demonstrated the presence of three Alcaligenes strains, Bacillus
sp., Achromobacter sp. and Pseudomonas sp. The 16S rDNA is being
sequenced for additional bioprospects. The potential of these microorganisms to
produce useful antimicrobial compounds is great and must be better explored.
Growing Botryococcus sp. on Municipal Wastewater
from Puerto Rico for Simultaneous Nutrient Removal and Energy Feedstock
Production. Catalina Dávila1, and Gary Toranzos2. 1Department of
Biology, School of Natural Sciences and Technology, Universidad del Turabo,
Gurabo, PR 00778; 2Environmental Microbiology Laboratory, Department
of Biology, University of Puerto Rico, Rio Piedras campus, Puerto Rico. Abstract: Several approaches
have been proposed for the biological treatment of wastewaters. Among these,
growing algae in wastewater effluents is a promising one, since it represents
an alternative for both nutrient load decline and reduction of treatment costs.
Furthermore, by simultaneously growing algae and remediating wastewaters it is
theoretically possible to produce algal by-products, such as oil, bioplastics
and nutraceuticals, in a sustainable way. However, few studies aiming to reduce
nutrient load in wastewaters from Puerto Rico have been performed with
microalgae and none of them have employed native species. We examined the
capability of Botryococcus sp., a newly isolated strain from a brackish
water pond in Puerto-Rico, of removing nutrients from urban wastewaters, as
well as its performance as a possible biofuel feedstock. Botryococcus
sp., was cultured in secondary and tertiary urban wastewater effluents for 18
days under continuous illumination and mechanical stirring. Biomass, lipid
content, lipid composition and nutrient removal efficiencies (i.e. N and P)
were measured. Results showed overall growth rates of 0.19 and 0.21 in the
secondary and tertiary effluents, respectively. Removal rates of NO3-N, NO2-N
and PO4-P were estimated at 100%, 90% and 40% in the secondary effluent and
96%, 57% and 98% in the tertiary effluent. NH4–N was totally removed from the
secondary effluent during the first three days of the incubation period. A
relative lipid content of 70% and 84% was found when culturing Botryococcus
sp. in secondary and tertiary effluents, respectively. Results from GC-MS
analysis showed a large quantity of long chain fatty acids, mainly palmitic,
stearic, oleic and linoleic acids, which resemble fatty acid profiles of plant
crops traditionally used as a source of biodiesel, suggesting that this strain
could be a good candidate for energy production. Our results reinforced the
possibility of using domestic wastewaters to grow Botryococcus sp. for
the removal of nutrients while producing oils with energy purposes. Also,
results demonstrate that growing microalgae in wastewater could be a more
efficient process for nutrient removal than other biological approaches.
Saccharomyces cerevisiae as a biosensor to study chemical mixtures and AHR
signaling. Chris A Muriel Mundo1, Emmanuel
Vázquez-Rivera2, and Christopher A. Bradfield2. 1Universidad Del Este,
Carolina, PR; 2Molecular and Environmental Toxicology Center,
University of Wisconsin-Madison. Abstract: The aryl hydrocarbon receptor (AHR) is a ligand-activated
transcription factor and member of the Basic-Helix-Loop-Helix-Per-Arnt- Sim
(bHLH-PAS) gene superfamily. It is best known for its binding affinity for many
environmental pollutants such as the polycyclic aromatic hydrocarbon (PAHs) and
the halogenated aromatic hydrocarbon (HAHs) like 2,3,7,8
tetrachlorodibenzo[p]dioxin (TCDD). The AHR is also considered to be an
intriguing receptor, because it physiological ligands and its function it is
unknown. Moreover, the lack of information on how mixtures of ligands influence
receptor mediated toxicity is poorly understood. This uncertainty regarding
variability in AHR mediated response from environmental mixtures is an
important issue in our attempts to identify and prevent adverse human and
ecological effects from the mixtures of AHR agonists that exist in the world.
To help in this regard, new or better methodologies for rapid and
cost-effective detection of toxicological agents that act through the AHR are
needed. Therefore, we have developed an AHR expression system using a
recombinant yeast cell of Saccharomyces cerevisiae to understand AHR ligand
signaling. The advantages of this system are many; For example, yeast cells
express a stable expression plasmid to produce the AHR protein and a separate
operator-driven reporter gene to allow study of AHR’s transcriptional activity.
Thus, thus system presents a more sensitive and rapid method to study AHR
ligands. In order to demonstrate this, we have performed β-galactosidase
reporter assays after exposing the yeast system to known AHR ligands. To
demonstrate a dose-response curve, a direct-dilution of each ligand was added
to 96-well inoculated microplate. The plates were incubated at 30 ºC for 2
hours in a shaker at 700 rpm. After this incubation time of chemical exposure,
50µl of Gal-Screen reagent was added to each well (Applied Biosystems),
followed by incubation for 1 hour at 28 ºC; 700 rpm. The activation of AHR was
measured by quantifying luminescence in the plate generated from the
β-galactosidase activity. Preliminary data suggest that our yeast system is
effective to identify a variety of AHR ligands with dose response relationships
similar to that observed in human cells.
Hexadecane Degradation Stimulates Bacterial Bioplastic
Production. Christian D. Del Valle-Colón, Yomarie
Bernier-Casillas, and José R. Pérez-Jiménez.
Puerto Rico Institute for Microbial
Ecology Research, School of Natural Sciences and Technology, Universidad del
Turabo, Gurabo, PR 00778. Abstract: Hexadecane is an organic compound found in petroleum and
biological waxes. Several bacterial species are specialized in hydrocarbon
degradation; useful role to remediate polluted sites. Bacterial
hexadecane-degraders have been found throughout diverse ecosystems in Puerto
Rico, regardless of their nature and degree of disturbance. Prokaryotes are
known to produce polyhydroxyalkanoates (PHA), a class of storage lipids that
serve as endogenous carbon and energy source during starvation periods. PHA can
replace synthetic polymers due to similar material properties. We hypothesized
that bacterial hexadecane-degradation will stimulate the production of
bioplastics inclusions as a preventive measure for the lack of certain
nutrients. Our objective has been to study the production of PHA by bacterial
strains capable of hexadecane degradation across ecosystems in Puerto Rico.
Soil samples were collected at eight sites under diverse pollution regimes. Hexadecane-degrading
bacteria (HDB) were isolated by aerobic cultivation on mineral media and
subjected to 16S rDNA sequencing. Isolates were assessed for bioplastic (PHA)
production by the Sudan Black stain method. Positive results were analyzed by
adding Nile Red or Nile Blue A to media plates at a final concentration of 0.5
mg/ml. Fluorescence under UV light after 48 hours confirmed the production of
PHA. A total of fifty-two putative HDB have been isolated. Among them, we found
close relatives to Klebsiella, Pseudomonas, Ralstonia, Rhodococcus,
Streptomyces, Bacilus, among others. All prospects have been able
to grow in 1.0% hexadecane concentration. All Klebsiella strains (n=7)
from Caño Martín Peña produced PHA; providing an additional alternative for
industrial products reducing the contamination generated as residuals. HDB
prevailed across Neotropical ecosystems, despite pollution level, are
phylogenetically diverse. Vigorous growth suggests adaptation to persistent
exposure to hexadecane. This collection of bioprospects provides novel isolates
to deal with the pollution and references for further disclosure of
biodegraders in nature.
Screening and partial characterization of moderate
halophilic hydrolases and their biotechnological applications. Iris V. Flores Rivera1, Aramis Villafañe1,
Lilliam Casillas1, Ezio Fasoli2. 1Department of Chemistry, 2Department
of Biology, University of Puerto Rico at Humacao, Humacao, PR, 00791. Abstract: Hydrolases are widely used enzymes in biocatalytic process
because of the low environmental impact of this methodology as well as their
ability to catalyze synthesis of chiral alcohols, esters, and acids with high
chemo-, regio-, and stereo-selectivity. Despite many examples of enzymes having
been employed or considered for applications at industrial level, the complete
shift from traditional chemical approach to greener biotechnological
alternatives (biocatalysis) is hampered by the instability of enzymes when
exposed to harsh conditions such as non-aqueous media or high temperature. With
the aim of expanding this enzyme platform and finding new hydrolyses with high
stability in a broad range of organic solvents, 153 moderately halophilic
bacteria from tropical solar salterns at Cabo Rojo (Puerto Rico) were screened
for extracellular esterase, lipase, protease, and epoxide hydrolase activities.
The enzymatic assays for esterase, lipase, and protease were performed in 96-well
plates using para-nitrophenyl derivatives as substrates. Adrenaline test was
used for determining epoxide hydrolase activity. Of all the microorganisms
screened, 45 isolates exhibited esterase activity, 12 were positive for
lipases, 47 for proteases, and 28 for epoxide hydrolases. Several isolates
showed multiple enzymatic activities. The positive hits were further assayed
for stability at increasing concentrations of acetonitrile, dioxane, and DMSO
(15%, 30% and 50% (v/v)). Three esterases, one lipase, two proteases, and two
epoxide hydrolyses showed high activity in organic solvents compared to others.
The isolates producing the selected enzymes were characterized biochemically
and by 16S DNA analysis. All strains were found to belong to the Bacillus genus
and can grow in 5-15% (w/v) salt concentration, pH 7.0 - 9.0, and at
temperatures in the range of 37-50 °C. All the strains grow in up to a 30%
concentration (v/v) of acetonitrile. Their related enzymes have similar optimal
activity conditions but differently from their parent microorganisms show a
basophile behavior. These activities detected and isolated from the salterns in
PR offer very promising candidates for use as biocatalysts in the chemical and
pharmaceutical industry. enzyme could be potentially useful in biocatalytic
process requiring the use of organic solvents and high temperature or pH.
Bacterial Prospects for Decane-Degradation from the San
Juan Bay Estuary System. Janmary Colón-Alicea, Yomarie
Bernier-Casillas, and José R. Pérez-Jiménez.
Puerto Rico Institute for Microbial
Ecology Research, School of Natural Sciences and Technology, Universidad del
Turabo, Gurabo, PR 00778. Abstract: Contamination by organic compounds has been a consequence of
industrial times. High concentrations can be harmful to all living things
especially to ecosystems that thrive with the anthropogenic activities that
take place each day. Decane is an organic compound derived from petroleum. Our
objective is to study the aerobic bacterial degradation of decane in the San
Juan Bay Estuary System (SJBES). Water samples were collected at different
points in the SJBES. Bacteria were isolated in general media by serial
dilution. Decane-degrading prospects were identified by aerobic cultivation on
mineral salt media supplemented with decane as sole carbon source. Decane degradation
was analyzed by colorimetric technique using the redox indicator
2,6-dichlorophenol indophenol. Twelve prospects have been identified so far
with decane-degrading capabilities. All of them are bacillus that respires
using oxygen (positive to catalase) with a combination of Gram positive (n=10)
and Gram negative (n=2) strains. In the colorimetric technique 100% of the
strains (n=6) were capable to start the degradation of decane in less than 24
hours. Future studies will include the characterization of decane-degrading
bacteria by 16S rDNA barcoding. The prevalence of other aliphatic alkane
degradation prospects across different ecosystems has been found across Puerto
Rico. By means of this research, we concluded that decane-degrading bacteria
could be found in the natural ecosystem regardless of the prevailing level of
pollution.
Fungal Diversity in Green Litter Decomposition in a
Hurricane Experiment Johnathan Velázquez Cruz, Ivia Moreno, María F. Barberena-Arías, and Sharon A. Cantrell School of Natural Sciences and Technology, Universidad del
Turabo, Gurabo, PR 00778. Abstract: Hurricanes generate disturbances in forests such as
canopy opening, fallen trees and leaves which in turn alter physicochemical
characteristics of the habitat, as well as, decomposer activity. Litter
decomposition depends primarily on the interaction among climate, litter
quality and biota; as a consequence, any change in habitats will result in
changes in these factors. Identifying the changes in the fungal community
structure in soil and forest floor litter can help understand the factors that
influence ecosystem recovery. This study is part of the Canopy Trimming
Experiment 2 performed by the Luquillo LTER at El Verde Field Station. For
this, three blocks (A, B and C) were selected, each with two plots of 20m x
20m, one plot was used for control and the other was subject to canopy opening
and debris addition (Trim plus debris).
In each subplot, litterbags with different mesh sizes (small, medium and
large) were placed. This experimental design represents 3 blocks x 2
plots/block (1 trim+debris/ 1 control) x 3 subplots x 3 litterbag mesh sizes x
4 collecting times (3, 5, 12 and 24 weeks), for a total of 216 litterbags. A
pool sample for each mesh size from the 3 subplots/per plot/time was obtained
for DNA extraction. DNA was extracted using Power Soil DNA Isolation kit from
MoBio. The TRFLP technique was used to obtain the profiles of the fungal
communities of each sample using the fungal ITS region. The diversity between
samples was analyzed using NMDS and UPGMA Cluster analysis using the Bray-Curtis
similarity index. Two way Permanova shows significant differences in fungal
communities between blocks, control and trim plus debris, and mesh size. No
significant differences were observed through time. In general, the diversity
of fungal communities increase in the trim plus debris treatment. This increase
is mainly due to the addition of detritus which increases soil moistures. Fungi
are the main decomposers of detritus in the forest floor and the effect of
natural disturbances such as a hurricane on leaf litter microbial communities
will help us understand how litter decomposition might be affected. This one component
of a larger study that is analyzing the interaction between arthropods,
microorganisms, nutrient mineralization and disturbances.
Response of Sulfate-Reducing Bacteria Communities to
Simulated Hurricane at El Yunque Rain Forest in Puerto Rico. Jonathan López Carrasquillo, and José R. Pérez-Jiménez. Puerto Rico Institute for Microbial Ecology Research, School
of Natural Sciences and Technology, Universidad del Turabo, Gurabo, PR 00778. Abstract: Sulfate-reducing
bacteria (SRB), that play a key role in the sulfur biogeochemical cycle, have
been found in different anoxic environments, including mangrove sediments and
elfin forest soils (El Yunque Rain Forest, Puerto Rico). Five life zones in El
Yunque (tabonuco, palm, elfin, dry, and colorado forests) are developed in an
elevation gradient subjected to natural disturbance and contrasting
physicochemical conditions. A Canopy Trimming Experiment (CTE), that simulated
the pass of a hurricane, has been already done in the Tabonuco forest. Samples
have been collected at various times to monitor changes in microbiota. Our goal
is to determine temporal heterogeneity of sulfate-reducing bacteria within the
experimental plots, as detritus deposition of simulated hurricane effect. Soil
samples are being collected from plots, every two weeks. Two treatments are
considered: with and without detritus deposition trimmed from the local canopy.
Total genomic DNA was extracted for amplification of the dissimilatory sulfite
reductase gene (dsrAB) and terminal restriction fragment length
polymorphisms (TRFLP) analysis of their MboI digests. According to the
Dice similarity index, under no detritus deposition, the similarity decreased
as time progress, 44% at time 0 to 17% at week 10. In contrast, diversity
increased over time where detritus was added. Sulfidogenic abundance was lower
in the absence of detritus (33 versus 94 phylotypes). The overall sulfidogenic
community was dominated by major phylotypes decreasing over time. Only two
phylotypes (184-, and 474-bp) persisted for both treatments and the five time
periods examined. Our results suggest that a simple sulfidogenic community
prevails in the Tabonuco forest soils that diversify as anoxic conditions are
exacerbated by the addition of plant residues and their sulfate-containing
residues are released to the soil. In the future, characterization of specific
taxa presented will be elucidated.
Toxicity of Functionalized Cd-Based Quantum Dots in
Aquatic Models. Julio A. Rivera de Jesús, and Sonia J.
Bailón Ruiz. 1Department of
Engineering; 2Department of Chemistry and Physics, University of
Puerto Rico, Ponce, PR 00734. Abstract: Quantum Dot are semiconductor nanocrystals with a ranging diameter
of 2 nm - 10 nm. Due to their optical properties, these nanoparticles have
several industrial and bio-medical applications like bio-imaging, the
production of LED’s (light emitting diode), Photodynamic Therapy, among others.
The present work is focused on the development of a protocol of ligand-exchange
applied to CdSe(S) quantum dots. These water-stable nanoparticles were
optically characterized by UV-Vis and Pholuminescence spectroscopies. UV-Vis
analyzes evidenced the presence of a shoulder peak at 400 nm which suggests the
formation of a solid like structure solution containing CdSe or CdS. It is known
that nanostructures of CdSe or CdS should exhibit absorption peaks in the
550-576 nm or 389-409 nm range. Subsequently, the band gap energy of these
nanomaterials was estimated at 2.32 eV which indicates a strong quantum
confinement. In addition, the Photoluminescence spectra of produced
nanoparticles showed a high emission peak at 553 nm and a full width at half
maximum (FWHM) ~ 50 nm. The small value of the FWHM confirms a narrow size
distribution in the sample, which contributes to the efficiency of quantum
dots’ optical properties. The chemical interaction of these nanoparticles with
bio-compatible molecules like glutathione was studied by Infrared spectroscopy
and the presence of glutathione on the quantum dots surface confirmed that the
ligand-exchange method was successfully achieved. Also, the toxicity of Cd on a
nanoscale size and Cd2+ in solution was evaluated on representative organisms
of the aquatic ecosystem. Preliminary studies suggested massive deaths at a
concentration equal or greater than 100ppm of cadmium sulfate in a brine shrimp
aquatic model. These results suggest that the nature of the organic cover on
the quantum dots surface is tightly related to the intrinsic toxicity of these
nanomaterials.
Antibacterial Effect of the Capsule and Leaf Extract of Azadirachta
indica. Karen E. Díaz Toledo1, Katiria J.
González-Rosario1, Rafael Rodríguez2, Piyali
Bhattacharyya3, Anastacio Emiliano Sosa1, Jonathan Otero1,
and José R. Pérez-Jiménez1.
1Puerto Rico Institute for Microbial Ecology Research, School
of Natural Sciences and Technology, Universidad del Turabo, Gurabo, PR 00778, 2University of Puerto Rico at Mayaguez, Mayaguez, PR 00861, 3School of Health Sciences, Universidad del Turabo, Gurabo,
PR 00778. Abstract: Human
history has been identified and used medicinal plants to combat many diseases. Azadirachta
indica (neem), commonly found in various parts of India, is an evergreen
tree that has many medicinal properties. Neem tree is the most researched tree
in the world because it has been found that every part possesses a wide range
of anti-bacterial, anti-inflammatory, anti-fungal and anti- cancer effects. The
purpose of the study was to investigate the activity of Azadirachta indica
capsule and leaf extract against six non-virulent strains. Qualitative and
quantitative trials were made to determine the effect of both extracts in each
bacterial strain. Bacteria were cultivated in tryptic soy broth (TSB)
containing various concentrations of neem capsule and leaf extract (initial
concentration of 10 mg/mL) at 37°C for 24 and 48 hours. Gram-negative bacteria
were less susceptible through time and concentration for both extracts. For the
quantitative trial, the Most Probable Method (MPN) was perform to determine if
there was inhibition of the cells due to the neem capsule and leaf extract. The
MPN shows that for 24 and 48 hours the extracts inhibit the growth of each
strain. Afterward, the minimum inhibitory concentration (MIC) and minimum bactericidal
concentration (MBC) was perform only in the capsule extract to study if the
inhibition turned out to be a bacteriostatic or bactericidal effect. None of
the bacteria grew in TSA in 24 and 48 hours showing that the inhibition was a
bactericidal effect. Ultimately, we aim to proceed with the MIC and MBC in the
leaf extract and identify the specific compounds that differ in each extract.
Dynamics of Microbial Groups in Response to Simulated
Hurricane at El Yunque Rain Forest in Puerto Rico. Karleen M.
González-Rosario, Sharon A Cantrell-Rodríguez, and José
R. Pérez-Jiménez. Puerto Rico Institute for Microbial Ecology Research, School
of Natural Sciences and Technology, Universidad del Turabo, Gurabo, PR 00778. Abstract: Climate variability
models predict increase in incidence and intensity of hurricanes. In Puerto
Rico, hurricanes have impacted the Luquillo Rain Forest in many occasions
resulting on canopy debris deposited in the forest floor. Inhabiting microbes
face input of complex plant biomass, increases in sunlight, and alterations in
redox potential that impact their prevalence and contributions to
biogeochemical cycles. A Canopy Trimming Experiment (CTE), that simulated the
pass of a hurricane, has been done in the Tabonuco forest. Our goal is to
determine temporal heterogeneity of three microbial groups (bacteria, fungi,
and ammonium oxidizing archaea) in response to detritus deposition of simulated
hurricane effect. Soil samples are being collected from plots, at different
times. Two treatments are considered: with and without detritus deposition
trimmed from the local canopy. Bacteria, fungi, and ammonium oxidizing archaea
are being characterized independently by the molecular analyses of four
distinctive genes (16S rDNA, ITS, and ammonium monooxygenase). Bacteria was homogeneous
over time for the same plot suggesting microbial succession in which rare
microbiota became more prevalent over time. In contrast, diversity increased
over time where detritus was added. Bacterial and fungal communities exhibited
spatial variation regardless the availability of plant debris. In contrast,
microbial functional groups examined demonstrated greater heterogeneity in
response to plant debris addition (treatments). In the future, we will analyze
the effect of a hurricane on the structure of soil microbial communities,
characterization of specific taxa, qPCR and Next Generation Sequencing.
Bioprospecting for Bacterial Xylose-Fermentation Among
Contrasting Ecosystems. Luis Eduardo Serrano-Torres, and José R. Pérez-Jiménez. Puerto Rico Institute for Microbial Ecology Research, School
of Natural Sciences and Technology, Universidad del Turabo, Gurabo, PR 00778. Abstract: Globally, energy
needs have pressured the quality and availability of air, water, and plant
feedstock. There is an urgent need to produce energy without depleting
nonrenewable resources. The source of biomass for ethanol production has
brought controversies and innovation to the biofuel research. Lignocellulosic
waste, resulting from food and forestry industries, is considered an
alternative source for bioethanol that protect the environment and is neutral
to feedstock. Since xylose forms much of the lignocellulosic material, it is
important to find efficient ways to convert this sugar into ethanol, such as
fermentation by bacteria, fungi or yeasts. Bacteria models are considered more
versatile than yeast and manageable than fungi. The objective of this study is
to isolate bacteria, across contrasting ecosystems, capable to convert xylose
into ethanol by fermentation. Samples were collected from soils subjected to
sustainable agriculture practices. General bacterial fraction was cultivated in
general media. Isolates were tested on a reformulated media for xylose fermentation.
Putative xylose-fermenting bacteria were characterized by Gram stain, catalase
test and 16S rRNA gene sequence. Over one hundred bacteria demonstrated xylose
fermentation. Among them, 16S rRNA sequencing provide close homologues to Pseudomonas
putida, Citrobacter sp., Enterobacter sp., Burkholderia
cenocepacia, Klebsiella pneumoniae, Stenotrophomonas
sp., Bacillus sp., Klebsiella oxytoca, Alcaligenes faecalis,
and Enterobacter aerogenes. Thus, diverse bacteria were found
capable of fermenting xylose among contrasting ecosystem. The research will
continue completing characterization of the collection, including kinetics for
ethanol production. Ultimately, fittest strains will be tested for upscale
ethanol production.
Evaluation of The Organic Cover and The Nanoparticle Size
on The Toxicity of Quantum Dots. Nadja M. Maldonado Luna, and Sonia Bailón Ruiz. 1Department of
Engineering; 2Department of Chemistry and Physics, University of
Puerto Rico, Ponce, PR 00734. Abstract: Quantum Dots (QDs) for biomedical applications need to be
bio-compatible, water stable and nontoxic. This research is addressed on the
generation of water-stable CdTe/S quantum dots with different coating species
such as cysteine an amino acid, Glutathione a peptide, and Albumin a protein.
It is expected that nanoparticles with different coatings can behave in
different ways at cellular level by interacting with cell membrane,
mitochondria or nucleus and can impart adverse effect like damage and potential
cellular death. Two size of CdTe/S quantum dots were previously synthesized in
aqueous phase by microwave irradiation and optically characterized using a
UV-Vis spectrophotometer and a Spectrofluorometer. CdTe/S QDs of larger size
evidenced a shoulder peak in the range 580 nm-600 nm which suggested the
formation of a structure like a solid solution containing Cd, Te and S. High
emission peak at 640 nm was observed, characteristic of nanomaterials based in
CdTe, and a full width at half maximum (FWHM) at 62 nm indicating a narrow size
distribution of nanocrystals. Whereas, CdTe/S QDs of smaller size revealed a
band gap peak in the range 550 nm -570 nm, a fluorescence peak centered at 574
nm and a FWHM at 48 nm. Glutathione was used to functionalize the QDs
containing Cd, Te and S as an attempt on obtaining a biocompatible and nontoxic
surface. Functionalized QDots will be structurally and optically characterized
using XRD and UV-Vis/PL spectroscopies, respectively. The toxicity of cadmium
acetate Cd(CH₃CO₂)₂ in aquatics organisms were evaluated through experiments of
exposure of brine shrimp Artemia Salina to cadmium solutions for 18-24 h and
36-48 h. These experiments showed that as the concentration of Cd(CH₃CO₂)₂
increased, the mortality rate increased in Artemia Salina. After 18-24 h of
exposure to 1000 ppm cadmium solution, 0% of the aquatic organisms where alive;
and after 36-48 h of exposure to 500 ppm cadmium solution, 0% where alive. The
mortality observed can be attributed to the generation of reactive oxygen
species by cadmium solutions in Artemia Salina.
Diet, Nutrition and the Prevention of Chronic Diseases. Piyali Bhattacharyya, Ángel Belén Rivera, and Jayson A. Díaz Corcino. School of Health Sciences, Universidad del Turabo, Gurabo,
PR 00778. Abstract: This investigation presents a framework descriptive of the
situation local and international related to the Nutrition and chronic
diseases, including the rate of mortality and its relation with obesity and
overweight. The Chronic diseases means -a long-term condition e.g., obesity,
diabetes, cardiovascular disease, cancer, HIV etc. May be prevented or delayed
with lifestyle changes e.g., healthier eating and more physical activity. The
purpose of this intervention is to show that the diseases chronic are prevented
if it takes in consideration a serious of changes of style of life and of political
public that may lead to modifications to the life significant and get them
results desired in reduce the rate of mortality and them diseases chronic. The
methodology that is use was descriptive since are used brochures that those
participating had that fill and answer a series of questions that have
relationship with his State of health. The data was collected from a series of
agencies which provided information necessary to the respect.1.9 million people
die as a result of physical inactivity; 2.7 million people die as a result of
low fruit and vegetable consumption; 2.6 million people die as a result of
being overweight or obese. The discussion shows the change of lifestyles and
practice of healthy eating habit can prevent those chronic diseases and
disorders. Good nutrition is key to preventing and correcting the obesity
epidemic worldwide.
Bio-catalysis- Screening and Partial Characterization of
Moderate Halophilic Hydrolases with Good Stability in Organic Solvents. Steven Toro
De León, and Ángel Miranda Santiago. University of Puerto Rico
at Humacao, Humacao, PR, 00791. Abstract: The use of Esterases in organic
synthesis is of immense significance because of the low environmental impact of
this methodology as well as the ability of these
enzymes to catalyze synthesis of chiral alcohols, esters and acids with high
chemo-, regio- and stereo-selectivity. Despite many examples having been
employed or considered for applications at industrial level, the complete shift
from traditional chemical approach to greener biotechnological alternatives
(biocatalysis) is hampered by the instability of esterases when exposed to
harsh conditions such as non-aqueous media or high temperature. Our hypothesis
is that new esterases from organisms occupying extreme hypersaline environments
(The salterns of Cabo Rojo, PR) will be more active and stable at the harsh
experimental conditions that are found in the laboratory (presence organic
solvents or ionic liquids, high temperature and extreme pH). Initially in the
investigation we have studied the activity and stability of esterases isolated
from the Saltern of Cabo Rojo (PR) in presence of organic solvents, high
concentration of salt and different Ph. We prove that in the case of halophilic
enzymes, the presence of organic solvents will stabilize the folded structure
by acting as salt mimicking agents in solvent/water mixture. The objective of
this project is to study the Chemo-, regio- and stereo selectivity of the
different enzymes towards the above substrates will be evaluated using GC/HPLC
equipped with chiral columns. One of the esters of interests is the
1,2-O-isopropylideneglycerol (solketal) which is an important intermediate at
different steps of the synthesis of glycerophospholipids, β-blockers,
carnitine, α-adrenergic antagonist, thromboxane synthetase inhibitor and
antitussive drugs. We will test the set of enzymes with the aim of finding more
stable and enantioselective hydrolases for the kinetic resolution of solketal
in hydrolysis and/or esterification reactions. The implantation of this project
will take one year. One publication in a peer review Journal and several
posters and oral presentation are expected outcome of this work
Variants of Sorghum as Substrate for Lignin Degradation by
Bacteria. Tiffany Del Valle-González, Solimar
García-Torres, and José R. Pérez-Jiménez.
Puerto Rico Institute for Microbial
Ecology Research, School of Natural Sciences and Technology, Universidad del
Turabo, Gurabo, PR 00778. Abstract: Lignin is a recalcitrant heteropolymer found in the cell wall of
plants to confer structural strength and delay biodegradation. It is the most
abundant constituent of plant debris and biomass with potential application as
a source for biofuel. Several fungal genera and few bacterial taxa are known to
degrade lignin. Lignin partition can release highly energetic components
embedded in the plant biomass not used as food source. Forage sorghum (Sorghum
vulgare) is considered a potential energy crop due to its reduced lignin
contents; grow under adverse conditions, and demands simple treatments. The
main hypothesis is if mesophilic lignin-degrading bacteria can grow in variants
of sorghum as the only carbon source, then lignin thermal treatments could be replaced.
The specific aim for this project is to study the growth response of various
lignin-degrading bacteria to various components of sorghum as sole carbon
source. Lignin-degrading bacteria were isolated from soil at Universidad del
Turabo, and water at the San Juan Bay Estuary system, both in Puerto Rico.
Sorghum components (leaves and fresh stem) were added independently, as sole
carbon source, to mineral base liquid and solid media. Growth was demonstrated
qualitatively by colony biomass on solid media and quantitatively by optical
density on liquid media. Twenty bacterial strains capable of lignin
deconstruction were isolated. Partial sequencing of the 16S rRNA genes resulted
in Lysinibacillus sp. and Acinetobacter sp. as closest
homologous. Fresh inner stem sorghum resulted on more biomass than other
substrates. These novel strains of lignin-degrading bacteria can provide an
alternative for biofuel production instead of fossil fuels. Clean energy will
be the focus for the next years as fossil fuels are in continual depletion.